Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssxa1B1AUS7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Ssxa1B1AUS7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssxa1B1AUS7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssxa1B1AUS7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssxa1B1AUS7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ssxa1B1AUS7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssxa1B1AUS7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssxa1B1AUS7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssxa1B1AUS7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssxa1B1AUS7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssxa1B1AUS7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssxa1B1AUS7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ssxa1B1AUS7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssxa1B1AUS7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ssxa1B1AUS7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssxa1B1AUS7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.57■□□□□ 0.72
Ssxa1B1AUS7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssxa1B1AUS7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssxa1B1AUS7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssxa1B1AUS7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssxa1B1AUS7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Ssxa1B1AUS7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ssxa1B1AUS7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ssxa1B1AUS7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ssxa1B1AUS7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssxa1B1AUS7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssxa1B1AUS7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms