Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5640A3KG49 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5640A3KG49 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5640A3KG49 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5640A3KG49 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5640A3KG49 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5640A3KG49 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5640A3KG49 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.81■□□□□ 0.92
Gm5640A3KG49 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5640A3KG49 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5640A3KG49 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.81■□□□□ 0.92
Gm5640A3KG49 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gm5640A3KG49 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.8■□□□□ 0.92
Gm5640A3KG49 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm5640A3KG49 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.79■□□□□ 0.92
Gm5640A3KG49 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5640A3KG49 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.78■□□□□ 0.92
Gm5640A3KG49 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5640A3KG49 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.77■□□□□ 0.92
Gm5640A3KG49 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5640A3KG49 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5640A3KG49 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5640A3KG49 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5640A3KG49 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Gm5640A3KG49 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.74■□□□□ 0.91
Gm5640A3KG49 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5640A3KG49 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Gm5640A3KG49 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Gm11599-201ENSMUST00000118720 878 ntBASIC20.73■□□□□ 0.91
Gm5640A3KG49 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5640A3KG49 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5640A3KG49 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.72■□□□□ 0.91
Gm5640A3KG49 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm5640A3KG49 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5640A3KG49 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5640A3KG49 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms