Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-1A0N8R1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-1A0N8R1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-1A0N8R1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav12-1A0N8R1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-1A0N8R1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Mir6538-201ENSMUST00000183713 110 ntBASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-1A0N8R1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-1A0N8R1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-1A0N8R1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms