Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm5580A0A0N4SVP8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm5580A0A0N4SVP8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm5580A0A0N4SVP8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Gm5580A0A0N4SVP8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm5580A0A0N4SVP8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm5580A0A0N4SVP8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.39■■□□□ 1.17
Gm5580A0A0N4SVP8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Gm5580A0A0N4SVP8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm5580A0A0N4SVP8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Gm5580A0A0N4SVP8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm5580A0A0N4SVP8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm5580A0A0N4SVP8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Gm5580A0A0N4SVP8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm5580A0A0N4SVP8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm5580A0A0N4SVP8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm5580A0A0N4SVP8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.35■■□□□ 1.17
Gm5580A0A0N4SVP8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm5580A0A0N4SVP8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.35■■□□□ 1.17
Gm5580A0A0N4SVP8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.35■■□□□ 1.17
Gm5580A0A0N4SVP8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm5580A0A0N4SVP8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Gm5580A0A0N4SVP8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm5580A0A0N4SVP8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm5580A0A0N4SVP8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5580A0A0N4SVP8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms