Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trdv2-1A0A0G2JGB9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Gm6821-201ENSMUST00000107540 542 ntBASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Gm9812-201ENSMUST00000061934 968 ntBASIC14.94□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.93□□□□□ -0.02
Trdv2-1A0A0G2JGB9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms