Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav13n-4A0A0G2JG01 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav13n-4A0A0G2JG01 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav13n-4A0A0G2JG01 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13n-4A0A0G2JG01 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav13n-4A0A0G2JG01 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav13n-4A0A0G2JG01 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav13n-4A0A0G2JG01 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-4A0A0G2JG01 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-4A0A0G2JG01 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-4A0A0G2JG01 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-4A0A0G2JG01 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav13n-4A0A0G2JG01 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav13n-4A0A0G2JG01 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Gm13241-201ENSMUST00000094493 780 ntBASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13n-4A0A0G2JG01 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13n-4A0A0G2JG01 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13n-4A0A0G2JG01 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Gm40881-201ENSMUST00000223397 166 ntBASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms