Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-1A0A0G2JEV5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-1A0A0G2JEV5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-1A0A0G2JEV5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7-1A0A0G2JEV5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7-1A0A0G2JEV5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7-1A0A0G2JEV5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav7-1A0A0G2JEV5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.77■□□□□ 0.12
Trav7-1A0A0G2JEV5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7-1A0A0G2JEV5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7-1A0A0G2JEV5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav7-1A0A0G2JEV5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7-1A0A0G2JEV5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav7-1A0A0G2JEV5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7-1A0A0G2JEV5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.71■□□□□ 0.11
Trav7-1A0A0G2JEV5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms