Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13n-1A0A0G2JEU8 Gm15039-201ENSMUST00000118914 875 ntBASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.76□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gm9847-201ENSMUST00000052528 599 ntBASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Gm13241-201ENSMUST00000094493 780 ntBASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.73□□□□□ -0.05
Trav13n-1A0A0G2JEU8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms