Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-3A0A0B4J1K1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gm5112-201ENSMUST00000204407 2368 ntBASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-3A0A0B4J1K1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Mir3960-201ENSMUST00000198213 73 ntBASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav4-3A0A0B4J1K1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav4-3A0A0B4J1K1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4-3A0A0B4J1K1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4-3A0A0B4J1K1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav4-3A0A0B4J1K1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms