Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-2A0A0B4J1J4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ighv9-2A0A0B4J1J4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.21■□□□□ 0.34
Ighv9-2A0A0B4J1J4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv9-2A0A0B4J1J4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Gm7417-201ENSMUST00000192950 473 ntBASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv9-2A0A0B4J1J4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.14■□□□□ 0.34
Ighv9-2A0A0B4J1J4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms