Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv16-104A0A0B4J1I1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv16-104A0A0B4J1I1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.08■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Gm26833-201ENSMUST00000180899 440 ntBASIC21.08■□□□□ 0.97
Igkv16-104A0A0B4J1I1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.08■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.07■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.07■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv16-104A0A0B4J1I1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Gm43060-201ENSMUST00000200621 289 ntBASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Igkv16-104A0A0B4J1I1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Igkv16-104A0A0B4J1I1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.01■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.99■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv16-104A0A0B4J1I1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms