Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-47A0A0A6YY41 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm43566-201ENSMUST00000196851 808 ntBASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-47A0A0A6YY41 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-47A0A0A6YY41 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-47A0A0A6YY41 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-47A0A0A6YY41 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm13238-201ENSMUST00000117655 780 ntBASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-47A0A0A6YY41 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-47A0A0A6YY41 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-47A0A0A6YY41 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-47A0A0A6YY41 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-47A0A0A6YY41 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-47A0A0A6YY41 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-47A0A0A6YY41 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms