Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv23A0A0A6YWQ1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv23A0A0A6YWQ1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv23A0A0A6YWQ1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Gm10420-201ENSMUST00000121713 882 ntBASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv23A0A0A6YWQ1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv23A0A0A6YWQ1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv23A0A0A6YWQ1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.52■□□□□ 0.4
Trbv23A0A0A6YWQ1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trbv23A0A0A6YWQ1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv23A0A0A6YWQ1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv23A0A0A6YWQ1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv23A0A0A6YWQ1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv23A0A0A6YWQ1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.49■□□□□ 0.39
Trbv23A0A0A6YWQ1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trbv23A0A0A6YWQ1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trbv23A0A0A6YWQ1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trbv23A0A0A6YWQ1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trbv23A0A0A6YWQ1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms