Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm28778A0A087WSK7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Gm7143-201ENSMUST00000222811 859 ntBASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.71■□□□□ 0.27
Gm28778A0A087WSK7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm28778A0A087WSK7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm28778A0A087WSK7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm28778A0A087WSK7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28778A0A087WSK7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28778A0A087WSK7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Gm9870-201ENSMUST00000063874 645 ntBASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28778A0A087WSK7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28778A0A087WSK7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm28778A0A087WSK7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gm28778A0A087WSK7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28778A0A087WSK7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.64■□□□□ 0.25
Gm28778A0A087WSK7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Gm28778A0A087WSK7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm28778A0A087WSK7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28778A0A087WSK7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.62■□□□□ 0.25
Gm28778A0A087WSK7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms