Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-1A0A075B699 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-1A0A075B699 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-1A0A075B699 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav9d-1A0A075B699 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-1A0A075B699 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Cap2-205ENSMUST00000225824 1634 ntBASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-1A0A075B699 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-1A0A075B699 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trav9d-1A0A075B699 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms