Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdv1A0A075B657 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdv1A0A075B657 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trdv1A0A075B657 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trdv1A0A075B657 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trdv1A0A075B657 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv1A0A075B657 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv1A0A075B657 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv1A0A075B657 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trdv1A0A075B657 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trdv1A0A075B657 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trdv1A0A075B657 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trdv1A0A075B657 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv1A0A075B657 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv1A0A075B657 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.55■□□□□ 0.08
Trdv1A0A075B657 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trdv1A0A075B657 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms