Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Trav16A0A075B653 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav16A0A075B653 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.78■□□□□ 0.12
Trav16A0A075B653 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Gm6311-201ENSMUST00000073790 878 ntBASIC15.78■□□□□ 0.12
Trav16A0A075B653 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav16A0A075B653 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav16A0A075B653 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.77■□□□□ 0.11
Trav16A0A075B653 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav16A0A075B653 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.76■□□□□ 0.11
Trav16A0A075B653 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav16A0A075B653 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16A0A075B653 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16A0A075B653 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16A0A075B653 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav16A0A075B653 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16A0A075B653 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav16A0A075B653 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav16A0A075B653 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav16A0A075B653 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Trav16A0A075B653 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav16A0A075B653 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms