Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-7-dv9A0A075B639 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav6-7-dv9A0A075B639 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav6-7-dv9A0A075B639 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav6-7-dv9A0A075B639 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-7-dv9A0A075B639 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-7-dv9A0A075B639 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav6-7-dv9A0A075B639 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav6-7-dv9A0A075B639 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav6-7-dv9A0A075B639 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav6-7-dv9A0A075B639 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav6-7-dv9A0A075B639 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trav6-7-dv9A0A075B639 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav6-7-dv9A0A075B639 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Trav6-7-dv9A0A075B639 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trav6-7-dv9A0A075B639 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-7-dv9A0A075B639 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-7-dv9A0A075B639 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-7-dv9A0A075B639 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
Trav6-7-dv9A0A075B639 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav6-7-dv9A0A075B639 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav6-7-dv9A0A075B639 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms