Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-1A0A075B601 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-1A0A075B601 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav9-1A0A075B601 Nsd1-203ENSMUST00000224156 1149 ntBASIC16■□□□□ 0.15
Trav9-1A0A075B601 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav9-1A0A075B601 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav9-1A0A075B601 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-1A0A075B601 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9-1A0A075B601 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-1A0A075B601 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-1A0A075B601 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-1A0A075B601 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Trav9-1A0A075B601 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav9-1A0A075B601 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Notumos-201ENSMUST00000151998 2659 ntBASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-1A0A075B601 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-1A0A075B601 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-1A0A075B601 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms