Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trav1A0A075B5Z4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
Trav1A0A075B5Z4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav1A0A075B5Z4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav1A0A075B5Z4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav1A0A075B5Z4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav1A0A075B5Z4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav1A0A075B5Z4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav1A0A075B5Z4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav1A0A075B5Z4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav1A0A075B5Z4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav1A0A075B5Z4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav1A0A075B5Z4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav1A0A075B5Z4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav1A0A075B5Z4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Trav1A0A075B5Z4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Trav1A0A075B5Z4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav1A0A075B5Z4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav1A0A075B5Z4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav1A0A075B5Z4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav1A0A075B5Z4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav1A0A075B5Z4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav1A0A075B5Z4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav1A0A075B5Z4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.08■□□□□ 0.64
Trav1A0A075B5Z4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav1A0A075B5Z4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav1A0A075B5Z4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav1A0A075B5Z4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav1A0A075B5Z4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms