Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trbv4A0A075B5I2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Trbv4A0A075B5I2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Trbv4A0A075B5I2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv4A0A075B5I2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv4A0A075B5I2 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.68■□□□□ 0.9
Trbv4A0A075B5I2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.68■□□□□ 0.9
Trbv4A0A075B5I2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trbv4A0A075B5I2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trbv4A0A075B5I2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trbv4A0A075B5I2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbv4A0A075B5I2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Trbv4A0A075B5I2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.66■□□□□ 0.9
Trbv4A0A075B5I2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbv4A0A075B5I2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv4A0A075B5I2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.64■□□□□ 0.9
Trbv4A0A075B5I2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trbv4A0A075B5I2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Trbv4A0A075B5I2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trbv4A0A075B5I2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trbv4A0A075B5I2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.64■□□□□ 0.89
Trbv4A0A075B5I2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trbv4A0A075B5I2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv4A0A075B5I2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv4A0A075B5I2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trbv4A0A075B5I2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv4A0A075B5I2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv4A0A075B5I2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv4A0A075B5I2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv4A0A075B5I2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Gm5812-201ENSMUST00000061073 957 ntBASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trbv4A0A075B5I2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv4A0A075B5I2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv4A0A075B5I2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbv4A0A075B5I2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.58■□□□□ 0.89
Trbv4A0A075B5I2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbv4A0A075B5I2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trbv4A0A075B5I2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trbv4A0A075B5I2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trbv4A0A075B5I2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trbv4A0A075B5I2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trbv4A0A075B5I2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Trbv4A0A075B5I2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms