Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm11667-201ENSMUST00000119828 486 ntBASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm23771-201ENSMUST00000178702 110 ntBASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Mir8115-201ENSMUST00000184992 119 ntBASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm44980-201ENSMUST00000205826 314 ntBASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcb1Q9Z0H3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm12208-201ENSMUST00000122004 163 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm22138-201ENSMUST00000158748 128 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Mir7076-201ENSMUST00000183519 74 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm27910-201ENSMUST00000185004 107 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcb1Q9Z0H3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcb1Q9Z0H3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms