Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ssu72Q9CY97 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.68□□□□□ -0.54
Ssu72Q9CY97 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Gm18187-201ENSMUST00000196476 984 ntBASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ssu72Q9CY97 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ssu72Q9CY97 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms