Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Scrt1Q99M85 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.4□□□□□ -0.75
Scrt1Q99M85 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Scrt1Q99M85 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Scrt1Q99M85 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Scrt1Q99M85 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Scrt1Q99M85 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.4□□□□□ -0.75
Scrt1Q99M85 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Scrt1Q99M85 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Scrt1Q99M85 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm11451-201ENSMUST00000118946 630 ntBASIC10.39□□□□□ -0.75
Scrt1Q99M85 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm7722-201ENSMUST00000120646 741 ntBASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm42657-201ENSMUST00000201746 211 ntBASIC10.39□□□□□ -0.75
Scrt1Q99M85 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.39□□□□□ -0.75
Scrt1Q99M85 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Scrt1Q99M85 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Scrt1Q99M85 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm11801-201ENSMUST00000117807 746 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm15595-201ENSMUST00000120840 961 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm6485-201ENSMUST00000160676 439 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm43520-201ENSMUST00000197996 164 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.38□□□□□ -0.75
Scrt1Q99M85 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.38□□□□□ -0.75
Scrt1Q99M85 Gm35960-201ENSMUST00000202712 767 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms