Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp11Q99K46 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp11Q99K46 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.44□□□□□ -0.42
Usp11Q99K46 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.44□□□□□ -0.42
Usp11Q99K46 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.44□□□□□ -0.42
Usp11Q99K46 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.44□□□□□ -0.42
Usp11Q99K46 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.44□□□□□ -0.42
Usp11Q99K46 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.44□□□□□ -0.42
Usp11Q99K46 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Usp11Q99K46 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.43□□□□□ -0.42
Usp11Q99K46 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Gm4857-201ENSMUST00000192718 785 ntBASIC12.43□□□□□ -0.42
Usp11Q99K46 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Gzmn-202ENSMUST00000225535 989 ntBASIC12.43□□□□□ -0.42
Usp11Q99K46 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.43□□□□□ -0.42
Usp11Q99K46 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.43□□□□□ -0.42
Usp11Q99K46 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp11Q99K46 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Usp11Q99K46 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp11Q99K46 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.42□□□□□ -0.42
Usp11Q99K46 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms