Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm16505-201ENSMUST00000179981 232 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm27530-201ENSMUST00000184096 98 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm4857-201ENSMUST00000192718 785 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm43438-201ENSMUST00000198133 379 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gm18065-201ENSMUST00000221395 526 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb6Q91XZ4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Gm15207-201ENSMUST00000119259 442 ntBASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Gm8566-201ENSMUST00000120174 465 ntBASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Mir6420-201ENSMUST00000185032 102 ntBASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Gm7940-201ENSMUST00000218195 769 ntBASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb6Q91XZ4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb6Q91XZ4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.08□□□□□ -0.47
Pcdhb6Q91XZ4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb6Q91XZ4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb6Q91XZ4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb6Q91XZ4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms