Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm9230-201ENSMUST00000188228 532 ntBASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm4857-201ENSMUST00000192718 785 ntBASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm30285-201ENSMUST00000214614 422 ntBASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 BC043934-202ENSMUST00000185694 2356 ntBASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga11Q91XY8 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Mir877-201ENSMUST00000104738 85 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gm12015-201ENSMUST00000117065 843 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gm25668-201ENSMUST00000157700 129 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gm3096-201ENSMUST00000185770 364 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdhga11Q91XY8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.46□□□□□ -0.58
Pcdhga11Q91XY8 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Gm22323-201ENSMUST00000103832 109 ntBASIC11.45□□□□□ -0.58
Pcdhga11Q91XY8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms