Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Gm12196-201ENSMUST00000120954 262 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Mir1943-201ENSMUST00000158276 73 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Gm26448-201ENSMUST00000082446 203 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Btrc-209ENSMUST00000224478 2194 ntBASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm3332-201ENSMUST00000189337 928 ntBASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm5733-201ENSMUST00000190232 939 ntBASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.57□□□□□ -0.24
Ddx41Q91VN6 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ddx41Q91VN6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm23251-201ENSMUST00000103773 110 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm26286-201ENSMUST00000104166 134 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm23912-201ENSMUST00000104687 87 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm12165-201ENSMUST00000117047 342 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm11511-201ENSMUST00000118146 540 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm12501-201ENSMUST00000119163 529 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm11941-201ENSMUST00000119904 610 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm43184-201ENSMUST00000197247 542 ntBASIC13.56□□□□□ -0.24
Ddx41Q91VN6 Gm4482-201ENSMUST00000200876 742 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms