Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
ShfQ8CG80 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ShfQ8CG80 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ShfQ8CG80 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
ShfQ8CG80 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
ShfQ8CG80 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.5□□□□□ -0.73
ShfQ8CG80 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ShfQ8CG80 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Gm26286-201ENSMUST00000104166 134 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Gm15370-201ENSMUST00000117158 253 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 Gm11930-201ENSMUST00000117788 190 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.49□□□□□ -0.73
ShfQ8CG80 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.49□□□□□ -0.73
ShfQ8CG80 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Gm5070-201ENSMUST00000177599 862 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.49□□□□□ -0.73
ShfQ8CG80 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
ShfQ8CG80 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
ShfQ8CG80 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm23270-201ENSMUST00000104055 131 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm14726-201ENSMUST00000120623 896 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm43966-201ENSMUST00000203301 612 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm43962-201ENSMUST00000203898 190 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm9823-201ENSMUST00000051212 327 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.48□□□□□ -0.73
ShfQ8CG80 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
ShfQ8CG80 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 316.7 ms