Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Mir8093-201ENSMUST00000185043 137 ntBASIC11.02□□□□□ -0.65
Cfap54Q8C6S9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cfap54Q8C6S9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cfap54Q8C6S9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cfap54Q8C6S9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.02□□□□□ -0.65
Cfap54Q8C6S9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm15136-201ENSMUST00000120552 533 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm14165-201ENSMUST00000121456 952 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gm9791-201ENSMUST00000060997 447 ntBASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cfap54Q8C6S9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm12470-201ENSMUST00000117239 1049 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm30055-201ENSMUST00000203175 803 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm5996-201ENSMUST00000211110 718 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 AC174797.2-201ENSMUST00000225835 165 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm5468-202ENSMUST00000227851 682 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cfap54Q8C6S9 Gm8968-201ENSMUST00000199133 1303 ntBASIC11□□□□□ -0.65
Cfap54Q8C6S9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms