Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm13916-201ENSMUST00000117368 628 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm15432-201ENSMUST00000121106 195 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm10051-201ENSMUST00000145209 414 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm6114-201ENSMUST00000182472 968 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm9211-201ENSMUST00000182882 975 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm28937-201ENSMUST00000185413 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm29400-201ENSMUST00000187208 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm28662-201ENSMUST00000188446 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm28251-201ENSMUST00000188835 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm37986-201ENSMUST00000193285 383 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm37318-201ENSMUST00000194325 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm38017-201ENSMUST00000194768 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm37287-201ENSMUST00000195449 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm37793-201ENSMUST00000195548 695 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm19080-201ENSMUST00000196082 550 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim47Q8C0E3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm10774-201ENSMUST00000188689 204 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm43947-201ENSMUST00000203019 959 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Gm8959-201ENSMUST00000213150 571 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim47Q8C0E3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms