Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm8731-201ENSMUST00000118088 412 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm10774-201ENSMUST00000188689 204 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm38151-201ENSMUST00000195085 289 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Nsd1-205ENSMUST00000224693 852 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nup54Q8BTS4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm9540-201ENSMUST00000188230 478 ntBASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm29499-201ENSMUST00000189151 486 ntBASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm28329-201ENSMUST00000191208 689 ntBASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm29171-201ENSMUST00000191397 486 ntBASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup54Q8BTS4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms