Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Usp1Q8BJQ2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.58□□□□□ -0.39
Usp1Q8BJQ2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.58□□□□□ -0.39
Usp1Q8BJQ2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm14193-201ENSMUST00000105067 153 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm8731-201ENSMUST00000118088 412 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm4310-201ENSMUST00000177847 889 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Mir7076-201ENSMUST00000183519 74 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp1Q8BJQ2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm22920-201ENSMUST00000102175 109 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm12579-201ENSMUST00000118040 783 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm23771-201ENSMUST00000178702 110 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm5706-201ENSMUST00000181525 993 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Snora73b-201ENSMUST00000083419 205 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp1Q8BJQ2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.56□□□□□ -0.4
Usp1Q8BJQ2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms