Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Matn2-203ENSMUST00000226766 3252 ntBASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm24398-201ENSMUST00000157870 109 ntBASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm8574-201ENSMUST00000203207 924 ntBASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcal1Q8BJL0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.39
Smarcal1Q8BJL0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.58□□□□□ -0.39
Smarcal1Q8BJL0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcal1Q8BJL0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcal1Q8BJL0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcal1Q8BJL0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcal1Q8BJL0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm25766-201ENSMUST00000104101 131 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm25880-201ENSMUST00000104331 132 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm11244-201ENSMUST00000121243 237 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm44315-201ENSMUST00000203041 219 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm44124-201ENSMUST00000204159 472 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm45594-201ENSMUST00000211717 241 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcal1Q8BJL0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms