Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm12164-201ENSMUST00000121695 551 ntBASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Depdc1bQ8BH88 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Depdc1bQ8BH88 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Depdc1bQ8BH88 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Depdc1bQ8BH88 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Depdc1bQ8BH88 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Depdc1bQ8BH88 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Gm23200-201ENSMUST00000104379 132 ntBASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Gm12266-201ENSMUST00000120311 962 ntBASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Depdc1bQ8BH88 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Gm5419-201ENSMUST00000119301 527 ntBASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Gm17040-202ENSMUST00000170597 889 ntBASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Depdc1bQ8BH88 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms