Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Paupar-201ENSMUST00000194826 3482 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm27956-201ENSMUST00000175604 260 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm7741-201ENSMUST00000181445 989 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm6114-201ENSMUST00000182472 968 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm23612-201ENSMUST00000103823 110 ntBASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm13624-201ENSMUST00000120263 462 ntBASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm23576-201ENSMUST00000179918 110 ntBASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Gm26670-202ENSMUST00000226862 340 ntBASIC9.87□□□□□ -0.83
Ttc28Q80XJ3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 Gm21778-201ENSMUST00000178779 471 ntBASIC9.86□□□□□ -0.83
Ttc28Q80XJ3 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms