Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Shc4Q6S5L9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Gm8566-201ENSMUST00000120174 465 ntBASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Shc4Q6S5L9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm13809-201ENSMUST00000117921 597 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm10774-201ENSMUST00000188689 204 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm35960-201ENSMUST00000202712 767 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Shc4Q6S5L9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms