Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm43106-201ENSMUST00000199485 637 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10□□□□□ -0.81
Rif1Q6PR54 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm3150-201ENSMUST00000166418 204 ntBASIC10□□□□□ -0.81
Rif1Q6PR54 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10□□□□□ -0.81
Rif1Q6PR54 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm18124-201ENSMUST00000210695 706 ntBASIC10□□□□□ -0.81
Rif1Q6PR54 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC10□□□□□ -0.81
Rif1Q6PR54 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC10□□□□□ -0.81
Rif1Q6PR54 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm28386-201ENSMUST00000189147 1849 ntBASIC10□□□□□ -0.81
Rif1Q6PR54 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10□□□□□ -0.81
Rif1Q6PR54 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm5855-201ENSMUST00000200240 1305 ntBASIC10□□□□□ -0.81
Rif1Q6PR54 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm14005-210ENSMUST00000225087 1413 ntBASIC10□□□□□ -0.81
Rif1Q6PR54 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rif1Q6PR54 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10□□□□□ -0.81
Rif1Q6PR54 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm13426-201ENSMUST00000117887 795 ntBASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm23105-201ENSMUST00000083719 134 ntBASIC9.99□□□□□ -0.81
Rif1Q6PR54 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.99□□□□□ -0.81
Rif1Q6PR54 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 CT025618.1-201ENSMUST00000227409 1279 ntBASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm8615-201ENSMUST00000025307 771 ntBASIC9.99□□□□□ -0.81
Rif1Q6PR54 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.99□□□□□ -0.81
Rif1Q6PR54 Gm30238-201ENSMUST00000195528 2603 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms