Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Scaf4Q6PFF0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Scaf4Q6PFF0 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Erich3-203ENSMUST00000189969 3460 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Gm10434-201ENSMUST00000101158 471 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Mir1247-201ENSMUST00000116706 82 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Gm11478-201ENSMUST00000117851 599 ntBASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.6□□□□□ -0.55
Scaf4Q6PFF0 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms