Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm18204-201ENSMUST00000209835 793 ntBASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Gm9487-201ENSMUST00000216600 472 ntBASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 AC122024.3-201ENSMUST00000217719 294 ntBASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Id2-203ENSMUST00000222667 958 ntBASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Gm26670-202ENSMUST00000226862 340 ntBASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd4Q6PDQ2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm14270-201ENSMUST00000118388 846 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm13019-201ENSMUST00000120000 276 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm5298-201ENSMUST00000201122 892 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm35713-201ENSMUST00000210516 199 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 AC164429.1-201ENSMUST00000224210 518 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd4Q6PDQ2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm8302-201ENSMUST00000119217 852 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm9135-201ENSMUST00000182963 990 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm6641-201ENSMUST00000196100 1315 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm24791-201ENSMUST00000104284 131 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Snord23-201ENSMUST00000116828 109 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Gm3836-201ENSMUST00000211377 1613 ntBASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd4Q6PDQ2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Gm7536-201ENSMUST00000077389 444 ntBASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd4Q6PDQ2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms