Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm11531-201ENSMUST00000117614 555 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm42627-201ENSMUST00000197347 224 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm43118-201ENSMUST00000199149 775 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm9899-201ENSMUST00000065519 555 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm5187-201ENSMUST00000117317 991 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm8062-201ENSMUST00000139696 444 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm38002-201ENSMUST00000193255 180 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Morn2-202ENSMUST00000227729 656 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smarcd3Q6P9Z1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smarcd3Q6P9Z1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms