Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Krt39Q6IFX4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Krt39Q6IFX4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm14644-201ENSMUST00000116671 647 ntBASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm11989-201ENSMUST00000117240 672 ntBASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm14723-201ENSMUST00000118686 215 ntBASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm11362-201ENSMUST00000118838 850 ntBASIC13.02□□□□□ -0.33
Krt39Q6IFX4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm10254-201ENSMUST00000052888 867 ntBASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Krt39Q6IFX4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm26956-201ENSMUST00000182176 986 ntBASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm6621-201ENSMUST00000193251 772 ntBASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm45865-201ENSMUST00000211815 945 ntBASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Krt39Q6IFX4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Krt39Q6IFX4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13□□□□□ -0.33
Krt39Q6IFX4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Krt39Q6IFX4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms