Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm11451-201ENSMUST00000118946 630 ntBASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm20495-201ENSMUST00000173902 235 ntBASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm44315-201ENSMUST00000203041 219 ntBASIC13.83□□□□□ -0.2
Krt40Q6IFX3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt40Q6IFX3 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Gm1848-201ENSMUST00000120711 789 ntBASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Gm10752-201ENSMUST00000218348 729 ntBASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Krt40Q6IFX3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm14071-201ENSMUST00000117817 509 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm7741-201ENSMUST00000181445 989 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm27438-201ENSMUST00000183480 110 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm44329-201ENSMUST00000197469 112 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm17825-201ENSMUST00000206836 794 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt40Q6IFX3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms