Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm7666-201ENSMUST00000146631 819 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm3150-201ENSMUST00000166418 204 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm3786-201ENSMUST00000202659 378 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.28□□□□□ -0.44
Smarcd1Q61466 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcd1Q61466 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd1Q61466 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd1Q61466 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd1Q61466 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd1Q61466 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcd1Q61466 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Gm14193-201ENSMUST00000105067 153 ntBASIC12.27□□□□□ -0.45
Smarcd1Q61466 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.27□□□□□ -0.45
Smarcd1Q61466 Gm22144-201ENSMUST00000157402 102 ntBASIC12.27□□□□□ -0.45
Smarcd1Q61466 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.27□□□□□ -0.45
Smarcd1Q61466 Gm12407-201ENSMUST00000180219 324 ntBASIC12.27□□□□□ -0.45
Smarcd1Q61466 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcd1Q61466 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.27□□□□□ -0.45
Smarcd1Q61466 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcd1Q61466 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Gm22920-201ENSMUST00000102175 109 ntBASIC12.26□□□□□ -0.45
Smarcd1Q61466 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Mir1943-201ENSMUST00000158276 73 ntBASIC12.26□□□□□ -0.45
Smarcd1Q61466 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Mir6546-201ENSMUST00000184460 62 ntBASIC12.26□□□□□ -0.45
Smarcd1Q61466 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.26□□□□□ -0.45
Smarcd1Q61466 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.26□□□□□ -0.45
Smarcd1Q61466 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.26□□□□□ -0.45
Smarcd1Q61466 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Smarcd1Q61466 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms