Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Six4Q61321 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.89□□□□□ -0.51
Six4Q61321 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Six4Q61321 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.88□□□□□ -0.51
Six4Q61321 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Mir7070-201ENSMUST00000183657 86 ntBASIC11.88□□□□□ -0.51
Six4Q61321 Mir8093-201ENSMUST00000185043 137 ntBASIC11.88□□□□□ -0.51
Six4Q61321 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Six4Q61321 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.88□□□□□ -0.51
Six4Q61321 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.88□□□□□ -0.51
Six4Q61321 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.88□□□□□ -0.51
Six4Q61321 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.88□□□□□ -0.51
Six4Q61321 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.88□□□□□ -0.51
Six4Q61321 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Six4Q61321 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Six4Q61321 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.87□□□□□ -0.51
Six4Q61321 Gm11783-201ENSMUST00000119549 885 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Gm15595-201ENSMUST00000120840 961 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.87□□□□□ -0.51
Six4Q61321 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.87□□□□□ -0.51
Six4Q61321 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Gm23085-201ENSMUST00000157849 293 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Mir5120-201ENSMUST00000175020 78 ntBASIC11.87□□□□□ -0.51
Six4Q61321 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Six4Q61321 Gm37246-201ENSMUST00000192665 835 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Gm38151-201ENSMUST00000195085 289 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Gm19208-201ENSMUST00000213861 912 ntBASIC11.87□□□□□ -0.51
Six4Q61321 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.87□□□□□ -0.51
Six4Q61321 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.87□□□□□ -0.51
Six4Q61321 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Six4Q61321 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Six4Q61321 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Six4Q61321 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Six4Q61321 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Six4Q61321 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Six4Q61321 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms