Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm13996-201ENSMUST00000118456 430 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm7722-201ENSMUST00000120646 741 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm29615-201ENSMUST00000185371 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28224-201ENSMUST00000186078 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm29001-201ENSMUST00000186177 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28292-201ENSMUST00000186593 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28101-201ENSMUST00000187608 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm29076-201ENSMUST00000187689 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28302-201ENSMUST00000187931 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28646-201ENSMUST00000188220 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28205-201ENSMUST00000189177 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm29032-201ENSMUST00000189797 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm28695-201ENSMUST00000190300 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm37448-201ENSMUST00000192795 697 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm17812-201ENSMUST00000204935 318 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm44262-201ENSMUST00000204969 372 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Mir433-201ENSMUST00000093564 124 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm15610-201ENSMUST00000120584 195 ntBASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm45224-201ENSMUST00000208203 414 ntBASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm45433-201ENSMUST00000209386 247 ntBASIC12.53□□□□□ -0.4
Syne3Q4FZC9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syne3Q4FZC9 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Syne3Q4FZC9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms