Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 AC154305.2-201ENSMUST00000225813 901 ntBASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3b2Q3UJB0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm8384-201ENSMUST00000190905 704 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm37452-201ENSMUST00000194416 1160 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm4978-201ENSMUST00000071565 801 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Gm44913-201ENSMUST00000208060 2990 ntBASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3b2Q3UJB0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm23745-201ENSMUST00000104230 125 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm6158-201ENSMUST00000109467 904 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm14165-201ENSMUST00000121456 952 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm7627-201ENSMUST00000183205 999 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Gm7238-201ENSMUST00000206467 973 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 CT025689.1-201ENSMUST00000225214 283 ntBASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3b2Q3UJB0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Sf3b2Q3UJB0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Gm24328-201ENSMUST00000175104 67 ntBASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Mir3060-201ENSMUST00000175339 83 ntBASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Gm26976-201ENSMUST00000182929 908 ntBASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Gm43249-201ENSMUST00000200464 458 ntBASIC15.2■□□□□ 0.02
Sf3b2Q3UJB0 Gm7192-201ENSMUST00000210793 1137 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 177.4 ms