Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12616-201ENSMUST00000118594 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm9550-201ENSMUST00000161130 862 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12624-201ENSMUST00000177615 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12621-201ENSMUST00000177760 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12615-201ENSMUST00000177970 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12622-201ENSMUST00000177975 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12627-201ENSMUST00000178412 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12625-201ENSMUST00000179122 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12614-201ENSMUST00000179586 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm12613-201ENSMUST00000180323 382 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm19287-201ENSMUST00000203190 358 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Ginm1-202ENSMUST00000065124 300 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cntn3Q07409 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm13809-201ENSMUST00000117921 597 ntBASIC12.38□□□□□ -0.43
Cntn3Q07409 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.38□□□□□ -0.43
Cntn3Q07409 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cntn3Q07409 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.38□□□□□ -0.43
Cntn3Q07409 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.38□□□□□ -0.43
Cntn3Q07409 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn3Q07409 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.37□□□□□ -0.43
Cntn3Q07409 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm10774-201ENSMUST00000188689 204 ntBASIC12.37□□□□□ -0.43
Cntn3Q07409 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms