Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Msx2Q03358 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.42□□□□□ -0.58
Msx2Q03358 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.42□□□□□ -0.58
Msx2Q03358 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.42□□□□□ -0.58
Msx2Q03358 Gm20614-201ENSMUST00000177106 632 ntBASIC11.42□□□□□ -0.58
Msx2Q03358 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.42□□□□□ -0.58
Msx2Q03358 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.42□□□□□ -0.58
Msx2Q03358 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.42□□□□□ -0.58
Msx2Q03358 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Msx2Q03358 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Msx2Q03358 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Msx2Q03358 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Msx2Q03358 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Msx2Q03358 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Msx2Q03358 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm15806-201ENSMUST00000120696 955 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Gm14441-201ENSMUST00000121960 540 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.41□□□□□ -0.58
Msx2Q03358 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm25261-201ENSMUST00000157416 134 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.41□□□□□ -0.58
Msx2Q03358 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.41□□□□□ -0.58
Msx2Q03358 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Gm5035-201ENSMUST00000215581 927 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.41□□□□□ -0.58
Msx2Q03358 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
Msx2Q03358 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Msx2Q03358 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.41□□□□□ -0.58
Msx2Q03358 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.41□□□□□ -0.58
Msx2Q03358 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Msx2Q03358 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Rgr-203ENSMUST00000225070 4704 ntBASIC11.4□□□□□ -0.58
Msx2Q03358 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Msx2Q03358 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.4□□□□□ -0.58
Msx2Q03358 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Msx2Q03358 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.4□□□□□ -0.58
Msx2Q03358 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.4□□□□□ -0.58
Msx2Q03358 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.4□□□□□ -0.58
Msx2Q03358 Gm27023-201ENSMUST00000182372 285 ntBASIC11.4□□□□□ -0.58
Msx2Q03358 Gm43002-201ENSMUST00000200310 155 ntBASIC11.4□□□□□ -0.58
Msx2Q03358 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.4□□□□□ -0.58
Msx2Q03358 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Msx2Q03358 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.4□□□□□ -0.58
Msx2Q03358 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms