Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.47□□□□□ -0.57
Mmp11Q02853 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm12857-201ENSMUST00000117678 592 ntBASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm11439-201ENSMUST00000118598 409 ntBASIC11.47□□□□□ -0.57
Mmp11Q02853 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.47□□□□□ -0.57
Mmp11Q02853 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm6450-201ENSMUST00000200896 574 ntBASIC11.47□□□□□ -0.57
Mmp11Q02853 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp11Q02853 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp11Q02853 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm15236-201ENSMUST00000117309 379 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm14277-201ENSMUST00000121195 360 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm27341-201ENSMUST00000183570 106 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm28937-201ENSMUST00000185413 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm29400-201ENSMUST00000187208 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm28662-201ENSMUST00000188446 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm28251-201ENSMUST00000188835 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm37318-201ENSMUST00000194325 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm38017-201ENSMUST00000194768 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm37287-201ENSMUST00000195449 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm37793-201ENSMUST00000195548 695 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.46□□□□□ -0.57
Mmp11Q02853 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.46□□□□□ -0.57
Mmp11Q02853 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.46□□□□□ -0.57
Mmp11Q02853 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Mmp11Q02853 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.46□□□□□ -0.58
Mmp11Q02853 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Mmp11Q02853 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Mmp11Q02853 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Mmp11Q02853 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Mmp11Q02853 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms